1.Zhu Jinjin, Wang Yang, aCao Yuanyun, Shen Jilong，Yu Li, *，Diverse roles of TgMIC1/4/6 in the Toxoplasma infection， Front. Microbiol., 2021，12:666506.
2.Wang Y, Han C, Zhou R, Zhu J, Zhang F, Li J, Luo Q, Du J, Chu D, Cai Y, Shen J, Yu L. Differential expression of TgMIC1 in isolates of Chinese 1 Toxoplasma with different virulence. Parasit Vectors. 2021，14(1):253.
3.Wang Y, Zhu J, Cao Y, Shen J *, Yu L*. Insight into inflammasome signaling: implications for Toxoplasma gondii infection. Frontiers in Immunology, 2020.（SCI, IF=5.085）
4.朱进进，程正阳，余莉.弓形虫棒状体蛋白ROP18表位肽抗体的制备与初步应用, 中国动物传染病学报. 2020
5.Zhang Famin , Su Rui, Han Chengjian, Wang Yang, Li Jingyang, Zhu Jinjin, Luo Qingli, Chen Lingzhi, Zhang Junling, Ding Xiaojuan, Du Jian, Chu Deyong, Cai Yihong, Shen Jilong, Yu Li. Production and Characterization of Monoclonal Antibodies Against Toxoplasma gondii ROP18 With Strain-Specific Reactivity. Parasitology, 2020; 147(9):940-948. doi: 10.1017/S0031182020000177. （SCI, IF=2.783）
6.沈继龙; 余莉.我国弓形虫病流行概况及防治基础研究进展.中国血吸虫病防治杂志, 2019, 31(01): 71-76.
7.Zhu W, Li J, Pappoe F, Shen J, Yu L. Strategies Developed by Toxoplasma gondii to Survive in the Host. Front. Microbiol. 2019,10:899.doi: 10.3389/fmicb.2019.00899（SCI, IF=4.259）
8.李婧旸,韩成建,刘志远, 张德然，余莉. TgMIC6的优化表达及其多克隆抗体的制备. 中国病原生物学杂, 14(2):345-349, 2019
9.An Ran, Tang Yuewen, Chen Lijian, Cai Haijian , Lai De-Hua, Liu Kang, Wan Lijuan, Gong Linli, Yu Li, Luo Qingli,Shen Jilong*, Lun Zhao-Rong*, Ayala Francisco J. *, Du Jian*. Encephalitis is mediated by ROP18 of Toxoplasma gondii, a severe pathogen in AIDS patients. PNAS , 115(23):E5344-E5352, 2018
10.Wang Cong, Cheng Weisheng , Yu Qian, Xing Tian, Chen Shoubin, Liu Lei , Yu Li, Du Jian, Luo Qingli, Shen Jilong*, Xu Yuanhong.* Toxoplasma Chinese 1 Strain of H3WΔrop16I/III/gra15II Genetic background Contributes to Abnormal regnant Outcomes in Murine Model. Frontiers in Immunology, 9:1222, 2018 (SCI, IF=5.511 JCR 2区)
11.Liu Lei, Jin Mengmeng, Tao Qing, Yu Li, Du Jian, Wang Cong, Luo Qingli, Xing Tian, Xu Yuanhong, Shen Jilong, Chu Deyong. * Effective amelioration of liver fibrosis through lentiviral vector carrying Toxoplasma gondii gra15II delivery to murine model. Frontiers in Immunology, 9:1572 , 2018
12.Zhang X, Su R, Cheng Z, Zhu W, Li Y, Wang Y, Du J, Cai Y, Luo Q, Shen J, Yu L. A mechanistic study of Toxoplasma gondii ROP18 inhibiting differentiation of C17.2 neural stem cells. Parasit Vectors. 10(1):585-594. doi: 10.1186/s13071-017-2529-2. 2017 (*通讯作者, SCI, IF=3.035 JCR 1区)
13.Li Y, Poppoe F, Chen J, Yu L, Deng F, Luo Q, Xu Y, Cai Y, Shen J. Macrophages Polarized by Expression of ToxoGRA15II Inhibit Growth of Hepatic Carcinoma. Front Immunol. 2017 13(8):137. doi: 10.3389/fimmu.2017.00137 (SCI, IF=5.695)
14.Tang, Yuewen; Zheng, Meijuan; An, Ran; Chen, Lijian; Gong, Lingli; Cai, Haijian; Liu, Kang; Yu, Li;Shen, Jilong; Du, Jian, Proteasomal degradation of T. gondii ROP18 requires Derlin2, Acta Tropica, 2017.10（174）：106-113
15.程正阳，苏蕊，张贤，李叶林，朱万博，余莉.弓形虫棒状体蛋白ROP18的优化表达. 中国病原生物学杂, 12 (4):345-349,2017.
16.Wang Y, Fan Z, Shao L, Kong X, Hou X, Tian D, Sun Y, Xiao Y, Yu L*. Nanobody-derived nanobiotechnology tool kits for diverse biomedical and biotechnology applications.Int J Nanomedicine. 11:3287-303，2016 (*通讯作者, SCI, IF=4.32)
17.程正阳， 张贤，苏蕊， 余莉.弓形虫感染对中枢神经系统的损伤机制及其对宿主行为的影响. 中国人兽共患病学报，32（8）：751-753，2016
18.张贤，甘小凤， 程正阳 ，都建，罗庆礼，沈继龙， 余莉. 弓形虫ROP18重组腺病毒载体的构建及其对神经干细胞C17.2凋亡的影响.中国人兽共患病学报，32（3）：234-239，2016
19.Gan X, Zhang X, Cheng Z, Chen L, Ding X, Du J, Cai Y, Luo Q, Shen J, Wang Y, Yu L. Toxoplasma gondii inhibits differentiation of C17.2 neural stem cells through Wnt/β-catenin signaling pathway. Biochem Biophys Res Commun. 473(1):187-93. 2016 (*通讯作者, SCI, IF=2.297)
20.余莉，沈际佳，李群，刘淼，张骏艳，陈灵芝. 感染与免疫整合课程的教学实践与思考. 卫生职业教育，34(1):6-7， 2016
21.张贤， 甘小凤， 程正阳 ， 余莉. 弓形虫棒状体蛋白2家族成员研究进展. 中国病原生物学杂志, 10(6):574-577,2015
22.Zhou J, Gan X, Wang Y, Zhang X, Ding X, Chen L, Du J, Luo Q, Wang T, Shen J, Yu L.*. Toxoplasma gondii prevalent in China induce weaker apoptosis of neural stem cells C17.2 via endoplasmic reticulum stress (ERS) signaling pathways. Parasites & Vectors. 8(1):73-79. 2015 (*通讯作者, SCI, IF=3.251 JCR 2区)
23.甘小凤, 张贤, 程正阳, 沈继龙, 罗庆礼, 余莉*.弓形虫抑制神经干细胞向神经元分化的研究. 中国病原生物学杂志. 9(11):1004-1008.2014 (*通讯作者).
24.余莉. 关于医学微生物学绪论课的教学体会，卫生职业教育，2014,32（8）：49-50
25.Wang T., Zhou J., Gan X.F., Wang H., Ding X.J., Chen L.Z., Wang Y.Z., Luo Q.L., Du J., Shen J.L., Yu L*. Toxoplasma gondii induce apoptosis of neural stem cells via endoplasmic reticulum stress pathway. Parasitology, 2014;141(7):988-95. （通讯作者, SCI, IF=2.355）
26.Du J, An R, Chen L, Shen Y, Chen Y, Cheng L, Jiang Z, Zhang A, Yu L, Chu D, Shen Y, Luo Q, Chen H, Wan L, Li M, Xu X, Shen J *.Toxoplasma gondii virulence factor ROP18 inhibits the host NF-kB pathway by promoting p65 degradation. J Biol Chem, 2014, 289(18):12578-92
27.Yu L., Shen J.L., Su C.L., Sundermann C. A. Genetic characterization of Toxoplasma gondii in wildlife from Alabama, USA. Parasitol Res , 2013；112,（3）： 1333-1336（SCI, IF=2.149）
28.Zhang A.M., Shen Q., Li M., Xu X.C., Chen H., Cai Y.H., Luo Q.L., Chu D.Y., Yu L., Du J., Lun Z.R., Wang Y., Sha Q., Shen J.L. Comparative studies of macrophage-biased responses in mice to infection with Toxoplasma gondiiToxoDB #9 strains of different virulence isolated from China. Parasit Vectors. 2013; 6(1):308. （SCI, IF=3.246）
29.Wang L., Cheng H.W., Huang K.Q., Xu Y.H., Li Y.N., Du J., Yu L., Luo Q.L., Wei W., Jiang L., Shen J.L. Toxoplasma gondii prevalence in food animals and rodents in different regions of China: isolation, genotyping and mouse pathogenicity. Parasit Vectors. 2013;6:273. （SCI, IF=3.246）
30.Dubey J.P., Choudhary S., Ferreira L.R., Kwok O.C., Butler E., Carstensen M., Yu L., Su C. Isolation and RFLP genotyping of Toxoplasma gondii from the gray wolf (Canis lupus). Vet Parasitol. 2013; 197(3-4):685-90. （SCI, IF=2.381）
31.Liu T., Zhang Q., Liu L., Xu X., Chen H., Wang H., Kong L., Wang W., Zhang A., Cai Y., Li M., Yu L., Du J., Wang X., Luo Q., Lun Z.R., Wang Y., Shen J. Trophoblast apoptosis through polarization of macrophages induced by Chinese Toxoplasma gondii isolates with different virulence in pregnant mice.Parasitol Res. 2013; 112(8):3019-27. （SCI, IF=2.852）
32.Wang H., Wang T., Luo Q.L., Huo X.X., Wang L., Liu T.T., Xu X.C, Wang Y., Lu F.L, Lun Z.R., Yu L*., Shen J.L . Prevalence and genotypes of Toxoplasma gondii in pork from retail meat stores in Eastern China. Int J Food Microbiol. 2012; 157(3):393-7. （通讯作者，SCI, IF=3.327 JCR 2区）
33. Wang L, Huo XX, Chen ZW, Chen H, Yu L, Song XR, Faustina HL, Luo QL, Shen JL. Kinetic distribution of cyst-forming Chinese isolate of Toxoplasma gondii in mice. Zhongguo Ji Sheng Chong Xue Yu Ji Sheng Chong Bing Za Zhi. 2012; 30(3):179-83.
34.Liu Honglin, Yang Liangbao, Yu Li, Meng Fanli, Yua Xinyao , Liu Jinhuai, Plasma- and anneal-assisted hybridization of SWCNT-Au network for rapid and high-sensitive electrical detection of antibody-antigen interactions, J. Mater. Chem., 2012; 22, 6139–6147, (SCI,IF=7.443)
35.Chen Z.W., Gao J.M., Huo X.X., Wang L., Yu L., Halm-Lai F., Xu Y.H., Song W.J., Hide G., Shen J.L., Lun Z.R. Genotyping of Toxoplasma gondii isolates from cats in different geographic regions of China. Vet Parasitol. 2011;183(1-2):166-70. (SCI, IF=2.579）
36.Liu L., Liu T., Yu L., Luo Q.L., Hu Y.S., Song W.J., Lun Z.R., Lu F.L., Wang Y., and Shen J.L. rROP2186–533: a Novel Peptide Antigen for Detection of IgM Antibodies Against Toxoplasma gondii. Foodborne Pathogens and Diseases.2011；9(1):7-12. (SCI, IF=2.26）
37.余莉，方海红，吕树娟，陈灵芝，丁晓娟，王明丽.七年制临床医学生基础医学阶段的科研训练实践. 医学教育探索.2009, 8(2):196-198.
38.余莉，朱新伊，胡元生，张俊玲，罗庆礼，沈继龙. 敏感性PCR检测猪肉弓形虫方法的建立与应用. 中国人兽共患病学报. 2010； 26(10)：895-900
39.Yu L., Gao Y.F., Qiao Z.P., Li C.L., Li X., Shen J.L. Double-Stranded RNA Specific to Adenosine Kinase and Hypoxanthine-Xanthine–Guanine-Phosphoribosyltransferase Retards Growth of Toxoplasma Gondii. Parasitology Research. 2009;104(2):377-383 （SCI, IF=1.473）
40.Yu L., Gao Y.F., Qiao Z.P., Li C.L., Li X., Shen J.L. Toxoplasma Gondii: siRNA can mediate the suppression of adenosine kinase expression Experimental Parasitology.2008; 118(1):96-102（SCI, IF=1.751）
41.Gao YF, Yu L, Wei W, Li JB, Luo QL, Shen JL. Inhibition of hepatitis B virus gene expression and replication by artificial microRNA. World J Gastroenterol. 2008; 14(29):4684-9（SCI, IF=2.081）
42.Wang Y.Z., Yu L., Han L.M., Sha X.Y., Fang X.L. Difunctional Pluronic copolymer micelles for paclitaxel delivery: Synergistic effect of folate-mediated targeting and Pluronic-mediated overcoming multidrug resistance in tumor cell lines, International journal of pharmaceutics. 2007; 337(1-2):63-73（SCI, IF=3.061）
43.Chu D.Y., Luo Q.L., Li C.L., Gao Y.F., Yu L., W W., J. Shen J.L. Paeoniflorin inhibits TGF-b1-mediated collagen production by Schistosoma japonicum soluble egg antigen in vitro. Parasitology. 2007; 134: 1611-1621（SCI, IF=2.306）
44.余莉，李霞，郜玉峰，罗庆礼，乔增培，沈继龙. SiRNA干扰嘌呤补救合成途径的关键酶对弓形虫增殖的抑制作用.中国人兽共患病学报.2009, 25（1）:9-12
45.余莉，李霞，郜玉峰，罗庆礼，乔增培，沈继龙. SiRNA抑制弓形虫次黄嘌呤-黄嘌呤-鸟嘌呤磷酸核糖转移酶的表达. 安徽医科大学学报.2008, 43（4）:376-380
46.李霞，余莉 ，罗庆礼，乔增培，沈继龙.弓形虫腺苷激酶基因的克隆、表达及多抗血清的制备.中国人兽共患病学报. 2008；24（6）：495-499
47.吴君霞，沈继龙，罗庆礼，乔增培，余莉，胡元生. 重组抗原联合用于弓形虫病IgG免疫诊断的研究. 临床输血与检验. 2008；l0（3）：239-242
48.乔增培，沈继龙，余轶婧，李霞，余莉. sag5b：一种用于鉴别弓形虫虫株毒力的新基因. 中国人兽共患病学报. 2008；24（3）：189-192
49.李霞，余莉，罗庆礼，乔增培，沈继龙.弓形虫次黄嘌呤-黄嘌呤-鸟嘌呤磷酸核糖转移酶基因的克隆和原核表达. 临床输血与检验. 2007；9（2 ）：97-101
50.余莉,李艳秋,王明丽等.HCMV先天性感染胎鼠脑组织中iNOS基因的表达.安徽医科大学学报. 2003； 38（3）:175-178
51.余莉,王明丽.巨细胞病毒编码的趋化因子及趋化因子受体同源物.病毒学报.；2004；20(2):186-189
52.李艳秋,余莉,王明丽等.HCMV pp65 DNA疫苗诱导小鼠的细胞免疫应答.安徽医科大学学报. 2003；38(2):98-101
教材编写：
1.《弓形虫与弓形虫病》，沈继龙等主编，余莉等副主编，人民卫生出版社，2021出版；
2.《病原生物学与免疫学》，余莉主编，安徽大学出版社，2019；
3.《医学微生物学》，黄汉菊主编，余莉参编，高等教育出版社，2019；
4.《感染与免疫》，余莉主编，安徽医科大学内部出版，2014；
5.《感染与免疫》实验讲义，余莉主编，安徽医科大学内部出版，2014；
